|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PH01000890G0360 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
|
Family |
ERF |
Protein Properties |
Length: 204aa MW: 20993.9 Da PI: 11.456 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01000890G0360 | genome | ICBR | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.9 | 7.1e-20 | 19 | 69 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr ++ +gr++AeIrdp+ r +r++lg+f+tae Aa+a++aa++ ++g
PH01000890G0360 19 PRFRGVRKRP-WGRYAAEIRDPT----RkARVWLGTFDTAEAAARAYDAAALHFRG 69
689*******.**********84....35***********************9998 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 204 aa
Download sequence Send
to blast |
MAPKNAPSVA AAVADGMEPR FRGVRKRPWG RYAAEIRDPT RKARVWLGTF DTAEAAARAY 60 DAAALHFRGP KAKTNFPVAY AHVPPPKALA TAVSPSSSTV ESSSPDSPAT APPTAALVAA 120 PSLDLSLGMP VAAQPFLFPD PRFAVTVAVA APVPHRPAVA AGKKALARVE EQSDTGSSSS 180 VVDASPAVGA RRPRRLRSGA SAR*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | FP093387 | 0.0 | FP093387.1 Phyllostachys edulis cDNA clone: bphylf043h08, full insert sequence. |