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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PH01000887G0500 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 174aa MW: 17593.4 Da PI: 6.2467 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01000887G0500 | genome | ICBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.3 | 8.1e-18 | 27 | 75 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
ykGVr ++ +g+Wv+eIr ps+ ++r++lg++ tae Aa+a++aa ++l+g
PH01000887G0500 27 YKGVRMRS-WGSWVSEIRAPSQ---KTRIWLGSYSTAEAAARAYDAALLCLKG 75
9****998.**********964...6************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 174 aa
Download sequence Send
to blast |
MVKTATSNDA AAAKQLSGGG HGGKKTYKGV RMRSWGSWVS EIRAPSQKTR IWLGSYSTAE 60 AAARAYDAAL LCLKGSAAAD LAAAAMSPKS IQLIAAAAAA NARATVFTSA DSASASDSTT 120 PACSSSNASA VSSPETVSSE AAHEGDFDGG DVDYSSLADI EAFFQSPKCM EHM*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT037212 | 9e-73 | BT037212.1 Zea mays full-length cDNA clone ZM_BFb0159C05 mRNA, complete cds. |
GenBank | BT069161 | 9e-73 | BT069161.2 Zea mays full-length cDNA clone ZM_BFb0217B24 mRNA, complete cds. |