![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
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TF ID |
PH01000841G0400 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 261aa MW: 27595.6 Da PI: 4.8619 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01000841G0400 | genome | ICBR | View CDS |
|
Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Phe&pid=PH01000841G0400) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.6 | 3.1e-18 | 89 | 139 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+++++g
PH01000841G0400 89 PVYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 139
68*****998.**********843...6***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MAPQELQETS SSSSSSTTSS TSSCSSTVTD SSSSPSTPVR ANAAAPAVPR KRRQAAEVEA 60 GGGGGGGGEE EEDAGKTKKR KRSSDGKHPV YRGVRMRAWG KWVSEIREPR KKSRIWLGTF 120 PTAEMAARAH DVAALAIKGR AAHLNFPDLA GVLPRAASPA PKDVQAAAAL AAVFTSPSLS 180 SDQSEKADAA CLVQEEPAPE NPATAPSSGS GEEEEERQLF DLPDLLLDIR TGFGFSTMWA 240 PLPDVEEVNA ELRLEEPLLW E
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FP097491 | 0.0 | FP097491.1 Phyllostachys edulis cDNA clone: bphylf042c03, full insert sequence. |