 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PH01000585G0570 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
|
| Family |
BES1 |
| Protein Properties |
Length: 225aa MW: 24393.3 Da PI: 8.9797 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PH01000585G0570 | genome | ICBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 142 | 5.6e-44 | 45 | 200 | 5 | 134 |
DUF822 5 rkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..................eeae 80
r++ ++E+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+Vl+AL+r+AGw++++DGtt+r +s+p+ a+
PH01000585G0570 45 RRRCEREKERTKLRERHRRAITSRMLAGLRQHGNFPLPARADMNDVLAALARAAGWTIQPDGTTFRSSSQPPplppaqlwyisfllsnqrCDAK 138
8899**************************************************************9999876654433333333322111345 PP
DUF822 81 aagssasaspesslq.sslkssalaspvesysaspksssfpspssldsislasa.......a 134
g+++ +s+e+++ ++l+s+a+ +p++s+++++++++++spsslds+ +a++
PH01000585G0570 139 CQGTFQVTSVETPTLtNALNSYAIGTPLDSQASVLQTDDSLSPSSLDSVVVAEQsiknenyG 200
6788999999999988999********************************99855554442 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 225 aa
Download sequence Send
to blast |
MSMKHPHPQV RDAEPSTSPP PPPDRRPRGF ASSAADTSAA APPPRRRCER EKERTKLRER 60
HRRAITSRML AGLRQHGNFP LPARADMNDV LAALARAAGW TIQPDGTTFR SSSQPPPLPP 120
AQLWYISFLL SNQRCDAKCQ GTFQVTSVET PTLTNALNSY AIGTPLDSQA SVLQTDDSLS 180
PSSLDSVVVA EQSIKNENYG NSSSVNSLNC LENDQVSKAL HLIG*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK120049 | 3e-70 | AK120049.1 Oryza sativa Japonica Group cDNA clone:J013000A07, full insert sequence. |
| GenBank | AP004886 | 3e-70 | AP004886.3 Oryza sativa Japonica Group genomic DNA, chromosome 2, PAC clone:P0576F08. |
| GenBank | AP014958 | 3e-70 | AP014958.1 Oryza sativa Japonica Group DNA, chromosome 2, cultivar: Nipponbare, complete sequence. |
