 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PH01000263G0760 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
|
| Family |
GATA |
| Protein Properties |
Length: 364aa MW: 37499.7 Da PI: 7.8883 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PH01000263G0760 | genome | ICBR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 55.9 | 6e-18 | 258 | 293 | 1 | 36 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkglk 36
C++C + kTp+WR gp g+ktLCnaCG+++++ +l+
PH01000263G0760 258 CTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLM 293
********************************9976 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009416 | Biological Process | response to light stimulus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MASEWEMAMG VELGMGMGTY HNAPGITAAP MGHHGNGGGF STAHHFYGMP PMGDAMRVDE 60
LLDLSNAGAH EFFPASATAA AADNGHHLGA MGEPSANTPS ATSSDHQTSM LSFADEFYIP 120
SEEAAELEWL SKFVDDSYSD IPNYSPAAHA AMAAAAAASA ASNGGVNSAG RDSCITAAPG 180
RGARSKRSRA TAAAAAAWHS LVPRPPSQSS PSSSCSSSDF PSSKPARPNG SNSNRGKKIP 240
GAGGAAGEVG MEGGVRRCTH CASEKTPQWR TGPLGPKTLC NACGVRFKSG RLMPEYRPAA 300
SPTFVLTQHS NSHRKVIELR RQKEIILIRG SHRDAAAAAA ASAAAGSAGA TGRPDLMFRD 360
YGVC
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes. {ECO:0000269|PubMed:12139008}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FP095215 | 0.0 | FP095215.1 Phyllostachys edulis cDNA clone: bphylf031m10, full insert sequence. |
