PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PH01000123G1240
Organism
Phyllostachys heterocycla
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
Family G2-like
Protein Properties Length: 448aa    MW: 49414.5 Da    PI: 8.6993
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PH01000123G1240genomeICBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.93e-30191244255
          G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      pr+rWt+eLH+rFveave LGG+++AtPk il+lm+vkg++++h+kSHLQ+YR+
  PH01000123G1240 191 PRIRWTEELHRRFVEAVECLGGQDEATPKGILQLMGVKGISISHIKSHLQMYRS 244
                      8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.768187247IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.9E-28188245IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-24191245IPR006447Myb domain, plants
SuperFamilySSF466893.76E-16191247IPR009057Homeodomain-like
PfamPF002499.2E-8194243IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    Send to blast
MVYVIVTAVT RATSSNPSRP RDATSVCHRQ QPNLLLHLNL AVDHHRRPRP PGEHLIGFAI  60
ASTTRWYHLS SVKLRHSLSI VGTRAYRVVT SGNFEEGVPQ DQDQYLDRIP SKCAKSIVRR  120
NPSIDVHQNL QERISEHVLM ILVLESSAFS PERGEEAGSR LGIDQAAGVM MIRGRGFERE  180
GVRQYNRTDV PRIRWTEELH RRFVEAVECL GGQDEATPKG ILQLMGVKGI SISHIKSHLQ  240
MYRSSKNNNF SRQISPRNPT LDTADKSTQE VVSTSRLECR RARASDHQDV PHARTRAPDK  300
ANSADWIVFG RWEQGQNTTF RAPWSSFDVL TAEKVCSIGS YCHRKPQRKL QAVDGCELTL  360
SIRGGGVGAG CEEATSDVDG SGISDELPAL AVSSINGGHL GCSTGPPADA DGRFDPSYTN  420
TKQKETSGHR PAINLDLTIS SPCWLTS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A3e-17192246357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-17192246357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-17192246357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-17192246357Protein PHOSPHATE STARVATION RESPONSE 1
Cis-element ? help Back to Top
SourceLink
PlantRegMapPH01000123G1240
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54933758
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.12e-24G2-like family protein