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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PH01000115G0490 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 343aa MW: 36461.8 Da PI: 4.3049 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01000115G0490 | genome | ICBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 57.6 | 3.2e-18 | 103 | 153 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
++++GVr+++ +g+W+AeIrdp+ + r++lg+f tae Aa a++ a++ ++g
PH01000115G0490 103 TQFRGVRRRP-WGKWAAEIRDPV----KgVRVWLGTFPTAEAAALAYDDAARGIRG 153
579*******.**********75....44**********************98887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MCGGAILAEL IPSTPARRVT AGHLWPGQGK GKAKQHKGPE ADDFEAAFQE FDEDSEEEGV 60 DEMAMEEEVA ESKPFVFRAS SEKPSGGRAA RQPPAPSRRR KPTQFRGVRR RPWGKWAAEI 120 RDPVKGVRVW LGTFPTAEAA ALAYDDAARG IRGSRAKLNF PSSAATDTRK RGRAGAHAAP 180 AAMATPVIDL IDEEEEEDAT VQAASIKHEA EASESSESGP LPDFSWQGMS APDEAGAHPV 240 VEVVSDQPVD LGGAKKRPRT EPEDANEASP GASDSGDDAD ALFDAFLFAD QFAYFNGGAY 300 ESLDSLFSAN AVQSNAAADA DEGTGTGLWS FDDDCLVEGS LSY
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 98 | 110 | RRKPTQFRGVRRR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FP091898 | 0.0 | FP091898.1 Phyllostachys edulis cDNA clone: bphyem115l08, full insert sequence. |