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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PH01000004G0570 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Bambusoideae; Arundinarodae; Arundinarieae; Arundinariinae; Phyllostachys
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Family |
ERF |
Protein Properties |
Length: 341aa MW: 36344 Da PI: 9.2929 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PH01000004G0570 | genome | ICBR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63 | 6.6e-20 | 131 | 180 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp + +r++lg+f tae Aa+a+++a+++++g
PH01000004G0570 131 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALRFRG 180
7********.**********7.....337*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MASPAELMSG YYQEQEMSTM VSALTRVVGG RRRHAGEEPG GAGGNAPRRL RARAGVLPGR 60 AIAGVRSAKQ TEQVFKHAWA YRVLFYFVCA CAGAASEMSS DTQSAGASAA TMEEHHSPVS 120 NPEASDTPRR RYRGVRQRPW GKWAAEIRDP HKAARVWLGT FETAEAAARA YDEAALRFRG 180 NRAKLNFPED ARLHAATTNP APTQRPIATA STSPAVYPGA AQSSDYLSYQ MILQGRTTTT 240 NQGTLLPFYG GGAMTSSYSS GGGGTMSGFL GSYYSFPTSS VSVATVPSSA SSASGHYYSS 300 QDSHQSEAAT EWNWESALAY PATTASWSDS SQYPPPPHTQ *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FP091407 | 0.0 | FP091407.1 Phyllostachys edulis cDNA clone: bphyem102c19, full insert sequence. |