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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PGSC0003DMP400056374 |
Common Name | LOC102594399 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
ERF |
Protein Properties |
Length: 175aa MW: 19017.3 Da PI: 8.0247 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PGSC0003DMP400056374 | genome | PGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.6 | 5.4e-17 | 35 | 83 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
ykG+r +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g
PGSC0003DMP400056374 35 YKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYTTPVAAARAYDTAVYYLRG 83
9*****99.**********9...336*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 175 aa
Download sequence Send
to blast |
MEVDGVRSGD AGVVGGGGGG GGGCCSGKRK NERAYKGIRM RKWGKWVAEI REPNKRSRIW 60 LGSYTTPVAA ARAYDTAVYY LRGPSARLNF PELLVGDSGE LSDLSADAIR KKAVEVGARV 120 DAIQSSMAIS DDDGDGDNQL RRHESPARLK PCWFQEKPDL NLKPEPEGPE FDYW*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G50260.1 | 2e-49 | cooperatively regulated by ethylene and jasmonate 1 |