 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PGSC0003DMP400048106 |
| Common Name | LOC107058871 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
LBD |
| Protein Properties |
Length: 135aa MW: 15074.8 Da PI: 4.6556 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PGSC0003DMP400048106 | genome | PGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 45 | 3.1e-14 | 5 | 60 | 44 | 99 |
DUF260 44 kllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
++ +++p ++reda+ s+vyeA ar+rdPvyG+vg+i++lq+++ +l+++l+++ +
PGSC0003DMP400048106 5 NFQQEIPMDNREDAVISMVYEATARLRDPVYGSVGIISALQKHIFHLQSNLNEASA 60
6779999******************************************9998876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 135 aa
Download sequence Send
to blast |
MVDINFQQEI PMDNREDAVI SMVYEATARL RDPVYGSVGI ISALQKHIFH LQSNLNEASA 60
EAMSLRTQLS NASTSLPSSL LEVSPFTPVN HEFHHSQKSS QQNAYSNNDL HLLLPEAADY 120
CFQETDQVLR PLPY*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975518 | 1e-178 | HG975518.1 Solanum lycopersicum chromosome ch06, complete genome. |
