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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
PGSC0003DMP400046264 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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| Family |
TCP |
| Protein Properties |
Length: 455aa MW: 52221.6 Da PI: 8.797 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PGSC0003DMP400046264 | genome | PGSC | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 75.6 | 1.5e-23 | 100 | 234 | 1 | 128 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........................ 65
a+g+kdrhsk++T+ g++dRRvRls ++a++f+d+qd+LG+d++sk+i+WL+++a++ai +l +t
PGSC0003DMP400046264 100 ATGRKDRHSKVSTATGPKDRRVRLSPNTAIQFYDVQDRLGYDRPSKAIDWLIKEAQRAINALEKTpfqvfsnkidstnkalnvrneegq 188
589**************************************************************887777655555555444444444 PP
TCP 66 .........................................ssssaseceaesssssasnsssgkaaksaakskksqksaasalnlake 113
+
PGSC0003DMP400046264 189 faleqswsvdkkteleelarhstklnatmqhsadqfpegcyK----------------------------------------------- 230
444444444444444444444333333333333333333221............................................... PP
TCP 114 srakarararertre 128
++++
PGSC0003DMP400046264 231 -----------EQSS 234
...........2222 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 455 aa
Download sequence Send
to blast |
MNHQLQVSNE NEDKSSSQQE DDDDENKDEF FHEILQSDYQ HLQQWPNYFT APSATLVPKH 60
QNNTQCPSHK DETKKVSLKR KPKRAKKDVM EVHGSRIVRA TGRKDRHSKV STATGPKDRR 120
VRLSPNTAIQ FYDVQDRLGY DRPSKAIDWL IKEAQRAINA LEKTPFQVFS NKIDSTNKAL 180
NVRNEEGQFA LEQSWSVDKK TELEELARHS TKLNATMQHS ADQFPEGCYK EQSSKVCQAN 240
ATQIVNSSAN GSKIQSFCEF QTHPQAHFHS QTKRQSPNDA KIQSFCEYQT HPQSHFQSET 300
KKQSPNVAKT QSFCELQTHP QAHFHSQTKK QPTNDAKIQS FWELQTHPQG HFQSETKNQS 360
PNVAKTQSFC ELQTYPQGQF HSETKRQSAK DAKIQSFCEL QTYPQGQFHS ETKRQSAKDA 420
KIQSFCELQT YPQGQFHSET KRQSAKGCQD SIFL*
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