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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PGSC0003DMP400045958 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
ERF |
Protein Properties |
Length: 219aa MW: 24482.6 Da PI: 4.7516 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PGSC0003DMP400045958 | genome | PGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.2 | 1e-18 | 37 | 87 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr ++ +g+Wv+eIr p++ + r++lg++ t+e+Aa+a++ a+++++g
PGSC0003DMP400045958 37 PVYRGVRMRS-WGKWVSEIRQPRK---KSRIWLGTYPTPEMAARAHDVAALSIKG 87
68*****998.**********843...6***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 219 aa
Download sequence Send
to blast |
MAELVQSSPI SVSKTEEPEE KEKEKRMEKR RRDESYPVYR GVRMRSWGKW VSEIRQPRKK 60 SRIWLGTYPT PEMAARAHDV AALSIKGNSA ILNFPQLVES LPRPASISPR DVQAAAAKAA 120 AMDELNSSVS SSSTLSESME ETMTVAAASE DQLGQIIELP NLEGIFESEK MKLSDSGEGW 180 VYPPPWGEFE DEFCGYFFEH TAIGESLIPS KFETMKWA*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JN125862 | 0.0 | JN125862.1 Solanum tuberosum dehydration-responsive element-binding protein DREB1 (DREB1) mRNA, complete cds. |
GenBank | JX428803 | 0.0 | JX428803.1 Solanum tuberosum AP2 c4 mRNA, complete cds. |