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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PGSC0003DMP400040959 |
| Common Name | LOC102593688 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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| Family |
bZIP |
| Protein Properties |
Length: 462aa MW: 52241.6 Da PI: 6.9576 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PGSC0003DMP400040959 | genome | PGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 31.7 | 3.3e-10 | 167 | 199 | 5 | 37 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvke 37
k rr+++NReAAr+sR RKka++++Le+
PGSC0003DMP400040959 167 KTLRRLAQNREAARKSRIRKKAYVQQLETSRVR 199
7789***********************985444 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 462 aa
Download sequence Send
to blast |
MDSSKNQISF INQHQFFHDP QQQQQQQMEN HKNHQISFGL SSTNPENFIS KENNGGAYDL 60
GELDQALFLY LDGQDPSSSS IQDQRQNNYG MRPPTLNIFP SQPMHIEPSS TKANNNALVS 120
QATNGSKKSS QPSIDKSEPP KVTKGEGSRK VPTSSPEQDT PKTSDPKTLR RLAQNREAAR 180
KSRIRKKAYV QQLETSRVRL SQLEHEIQRA RSQGFHVGGN VLLGGDQGFQ LINRTNISSD 240
AAVFDLEYAR WLEEHHRLIC ELRNAVHEEQ LQEDELRIYV ENCVVHYDNI MNLKGMLAKS 300
DVFHLVSGLW KSPAERCFLW IGDFRPSELL KIIMCQIEAL TENQLLGMCG LQKSTQEAED 360
ALSQGLEALN QSLSDTIIAS DALILGNNNE NMGNYMALAI NQLSTVEAFL RQADNLRHQT 420
IHRLLQILTT RQAARCFIAI GDYFHRLRAL SSLWLARPRH E*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC244286 | 1e-138 | AC244286.4 Solanum lycopersicum strain Heinz 1706 chromosome 10 clone hba-20a14 map 10, complete sequence. |
| GenBank | HG975522 | 1e-138 | HG975522.1 Solanum lycopersicum chromosome ch10, complete genome. |
