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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PGSC0003DMP400039575 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
ERF |
| Protein Properties |
Length: 227aa MW: 24398.7 Da PI: 9.7926 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PGSC0003DMP400039575 | genome | PGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 65.8 | 8.4e-21 | 32 | 82 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAaka+++a+++++g+
PGSC0003DMP400039575 32 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAAKAYDNAAREFRGA 82
6********.**********8...557*************************985 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009864 | Biological Process | induced systemic resistance, jasmonic acid mediated signaling pathway |
| GO:0010200 | Biological Process | response to chitin |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0016604 | Cellular Component | nuclear body |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 227 aa
Download sequence Send
to blast |
MAPKEKIGAV TAAAAAAVMA VGKLNGISKE VHYRGVRKRP WGRYAAEIRD PGKKSRVWLG 60
TFDTAEEAAK AYDNAAREFR GAKAKTNFPP LQKEEDLKFP VKNEINRSPS QTSTVESSSP 120
VMVDSSSPLD LRLCGSIGGF NHNTVRFPIS GGGFTGAVPA VNHMYYLEAL ARAGVINLET 180
NRKKTVDFLG GGDSDTSTVI DFMRVDVKPT IAGLNLDLNF PPPENM*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Strongly and quickly induced by ethylene. {ECO:0000269|PubMed:10945353}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EF091875 | 0.0 | EF091875.1 Solanum tuberosum ethylene response factor 3 (ERF3) mRNA, complete cds. |
