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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PGSC0003DMP400037231 |
| Common Name | LOC102583210 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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| Family |
NAC |
| Protein Properties |
Length: 563aa MW: 64345.7 Da PI: 4.8807 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PGSC0003DMP400037231 | genome | PGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 181.4 | 2.3e-56 | 6 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87
lppGfrFhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatg
PGSC0003DMP400037231 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EVIPEVDLYKCEPWDLPdKsLLPSKDMEWYFFSPRDRKYPNGTRTNRATKAGYWKATG 93
79****************************.99**************96435566888******************************* PP
NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
kd++v s + + +g+kktLv+y+grap+g++t Wvmheyrle
PGSC0003DMP400037231 94 KDRKVNS-QMRPIGMKKTLVYYRGRAPHGTRTGWVMHEYRLE 134
******9.999*****************************85 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 563 aa
Download sequence Send
to blast |
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPDKSLLPSK 60
DMEWYFFSPR DRKYPNGTRT NRATKAGYWK ATGKDRKVNS QMRPIGMKKT LVYYRGRAPH 120
GTRTGWVMHE YRLEERECEV ANGLQDAYAL CRVFKKSLNV PKIGDHYGSD RSGCSINDQL 180
YTEGRGEDSD YGMMPTTTSS SSMLLHGSPL MNVAPAPSND DNKWMQYLSD EANFTFNNNP 240
SFPTNGPFPY NHPSKVDIAL ECARLQHRFA LPPLEVQDFP QVGYVMSQSN DVMYHQSTTN 300
QTDIVQEILS VAQASHDLTN QEYSWDGNYN NINYGDDFSF LPHNNNHDLG NSFNFMDQLK 360
EDDDQNNSIP IVDFDEDFKS ETMVERLRWV GMSQKDDKTF LEDYKTVPIE NISGPHKEEQ 420
DQLQGEASGQ QNNMNETEAN NFSLGFGNDD NFLDDEETDG FSSSPSFEVY EKIEVNQGMF 480
IATRQVANTF YHQVAPSKTV TIHRDMVTMH EFPIRKITKN ATFLDTFMAF SRKTLSGVVM 540
RVNTLVELIA PLHAFWTILG NA*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-55 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-55 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-55 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-55 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 3e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 3e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 3e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 3e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 3e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 3e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 3e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 3e-55 | 1 | 162 | 12 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 3e-55 | 1 | 162 | 12 | 171 | NAC domain-containing protein 19 |
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