 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PGSC0003DMP400014334 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
NF-YA |
Protein Properties |
Length: 241aa MW: 27303.4 Da PI: 9.4918 |
Description |
NF-YA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PGSC0003DMP400014334 | genome | PGSC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | CBFB_NFYA | 93.6 | 2.4e-29 | 92 | 148 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
+ep+YVNaKQy++Il+RRq Rak+ ++k+ ksrkpylheSRh+hA+rR+R gGrF
PGSC0003DMP400014334 92 EEPMYVNAKQYHGILRRRQLRAKAVLQQKV-VKSRKPYLHESRHRHAMRRARDGGGRF 148
69****************************.**************************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 241 aa
Download sequence Send
to blast |
MFQKSDGDSK REGKHVEFMP PSMGENLRAA NQFELMAPSS IAFKSYPYSE VPQYSGGNVT 60 IACGEPMVNQ NMERSSAVHH NGRMILPVEV KEEPMYVNAK QYHGILRRRQ LRAKAVLQQK 120 VVKSRKPYLH ESRHRHAMRR ARDGGGRFLN TKKKTQSTTT TNNNTTPSSK GKSSMDSDSS 180 PNYLLNYEHE IGSSNHSNSV EGFQFQSGIH DTTENLQLGC HYQWNLNDNN HCNCMHSEHF 240 *
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 132 | 141 | RHRHAMRRAR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975449 | 1e-144 | HG975449.1 Solanum pennellii chromosome ch10, complete genome. |