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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PGSC0003DMP400013991 |
Common Name | LOC102591818 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
bHLH |
Protein Properties |
Length: 315aa MW: 34098.6 Da PI: 5.1949 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PGSC0003DMP400013991 | genome | PGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 50.7 | 3.1e-16 | 138 | 184 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn E+rRR++iN+++ L+ l+P++ K +Ka++L +A+eY+k+Lq
PGSC0003DMP400013991 138 VHNLSEKRRRSKINEKLKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 184
6*************************7.....5******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MADPYRTNPH AASSLESEDM SSFFLNFLQG TSASASATAA AGFYNRSVPV PVAESSSSLN 60 FSDPGRFYAA EFKEGVENVF ASAGLGDCDG MNSANRREFL EDDKVDNFGF SSEECDGLDM 120 PSDPTHPRSS KRSRSAEVHN LSEKRRRSKI NEKLKALQNL IPNSNKTDKA SMLDEAIEYL 180 KQLQLQVQML TLRNGLSLYP GYVPGSLQSV QLPSGNEFDG RSFMLSANGG ATLPVNREMP 240 QTAFEISNQN PSGKPTITSH NTENAVALET TIQNHYGVLN HLASSKDMCR DNTLSRLHID 300 MSCSGNNSSS GVSS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975443 | 1e-176 | HG975443.1 Solanum pennellii chromosome ch04, complete genome. |