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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PGSC0003DMP400011610 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
bHLH |
Protein Properties |
Length: 349aa MW: 36847.6 Da PI: 8.4981 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PGSC0003DMP400011610 | genome | PGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 33.5 | 7.6e-11 | 281 | 326 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+++Er RR ri ++ +L++l+P+ +k s a++L +Av++I+ Lq
PGSC0003DMP400011610 281 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYADMLDLAVQHIRTLQ 326
689*********************7....688*****************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0010119 | Biological Process | regulation of stomatal movement |
GO:0005829 | Cellular Component | cytosol |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MSHTSTTAGG GGGLTRYGSA PGSFLTTAVE SVVNGNHEFA SHGSHHSNLG PSRFFPSNLA 60 STSLNSESTS KAKEQSNLQR SIGFNDLTIG GGGGGGGGGG GLPTASTTPL VRHSSSPARF 120 LNQLATAAGD TGFSVSMGRG SYNSKGGGDS SRGITRLNSQ LSFTRQEALS QIAEENEDIE 180 GTSIANGHRK STHSYASASS FAMGSWEDNN SIMFSVTPGK RAKQISNDIV NGLDDGETQF 240 QFGLSQTALE MASMDRLLHI PEDSVPCKIR AKRGCATHPR SIAERERRTR ISGKLKKLQD 300 LVPNMDKQTS YADMLDLAVQ HIRTLQDQVQ NLNTELENCK CGCKKSSQ*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KU530153 | 1e-171 | KU530153.1 Solanum demissum R8 gene cluster, partial sequence. |