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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
PGSC0003DMP400008794 |
Common Name | LOC102582107 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
GRF |
Protein Properties |
Length: 598aa MW: 64328.1 Da PI: 8.3867 |
Description |
GRF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PGSC0003DMP400008794 | genome | PGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRC | 77.1 | 1.7e-24 | 206 | 250 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45
d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e
PGSC0003DMP400008794 206 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVEG 250
79****************************************985 PP
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2 | QLQ | 61.8 | 1.9e-21 | 138 | 174 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
++FT++Q+++L++Q+l+yKy+ an+P+Pp+Ll +i+k
PGSC0003DMP400008794 138 GPFTPSQWMELEHQALIYKYITANVPIPPYLLNPIRK 174
59*********************************86 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 598 aa
Download sequence Send
to blast |
MDFGGLDSGG GGVICSDNTS STMFVASAET KQKWYGSGGF NKHERSSVTE DEWNKESKLA 60 KTSDDFSSSK ATMMFQQLPI SHENQQMLSF STPNSQNHVT MPYYNQHPSS AFARNTSGYG 120 SGALSAGNMH GLIAGVKGPF TPSQWMELEH QALIYKYITA NVPIPPYLLN PIRKALESAG 180 FTTFAGLRPN ALGWGAFHLG FSNSNDPEPG RCRRTDGKKW RCSRDAVADQ KYCERHMNRG 240 RHRSRKPVEG QTGNSASGNN TGATTTSAKL TNMSSAASAA LASGGGAAAS NTLNLSHHNQ 300 LSNLQPAGTN LSTTSPYLER SYTAKENFGE RYSDTKGSSV VSPSVKEPQY SNQKAQNPYG 360 LTSRAEFGLV CADSLINPLN KNSSLVNCRG YVNSDVRDQE RKLQHHPLRQ FMDELPKTQS 420 DQSNVSWPDI DLQSDPTQLS ISIPLVTSDF MSSTSSPAND KLTASPHRSR EHEAIQMGLG 480 IGTIISEHNQ RQGSWIPISW ESSLGGPLGE VLHSTNSSSG DCKNKSALNL MTEGWDRSPR 540 MGSSPTGVLQ KSSFGSLSNS SAGSSPRAEH SKTTNEGSSL CNGLLGTTLM NPTLPAM*
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