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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
PGSC0003DMP400008313 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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| Family |
GRAS |
| Protein Properties |
Length: 513aa MW: 58916.5 Da PI: 5.1483 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PGSC0003DMP400008313 | genome | PGSC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 283.5 | 6.1e-87 | 122 | 497 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn.sseelaalklfsev 87
lve Ll+ Ae + ++ + a +lL++ +l+s++g+p++Rl+ yf +AL++r+ +++++ k l ++ + s ++++a ++ ++
PGSC0003DMP400008313 122 LVEHLLASAEKIGEKLFDSAINLLNECDKLSSKTGNPVERLVYYFSRALRERVDIeMGKNCTKGLGLHGMRDLQeSLRSINACTIAVQD 210
57899************************************************87799******977766654449999999999**** PP
GRAS 88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.....egppslRiTgvgspesgskeeleetgerLakfAee 171
P+ ++ ++ qaI+e ve+++++Hi+D++i++G+QW L+qaLa+ ++ l++T++ + + s++++eetg+rL +fAe+
PGSC0003DMP400008313 211 MPMCQVVKFAGIQAIVENVENSKKIHIVDLEIKMGVQWTILMQALANDHqhnsqNPLEYLKVTALIDVQ--SRTNVEETGKRLMSFAES 297
**********************************************5444564444559********66..****************** PP
GRAS 172 lgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflea 260
l+ p+ f++++++++ dl+ e+L+++p+E+laV +++ l ++ +++++ d ++ ++k++ P++++v+e ea++ns+ F++rf+ea
PGSC0003DMP400008313 298 LHFPLCFKIVMVEDILDLKKEDLDIDPDESLAVYSQYLLSNMI----TQQDRLDFLMGFIKEMTPRIMIVAEVEANLNSPVFVNRFIEA 382
*************************************999998....555556779********************************* PP
GRAS 261 leyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdg 348
l y+ alfd +e + +++++r+ +E+ ++ i+n+va+eg+er++rh t e Wre ++++G++++++s++ qak++++k+ ++
PGSC0003DMP400008313 383 LFYHGALFDLFEDCMKSNESTRKAMEEDVMWHGIRNIVANEGEERTMRHVTIELWREYFKRFGMEEMKMSNSSLYQAKTVVEKFTgKNS 471
*************************************************************************************9999 PP
GRAS 349 yrveeesgslvlgWkdrpLvsvSaWr 374
+++e +++ +++gWk+ pL s+SaW+
PGSC0003DMP400008313 472 FTLEMNEKFVTIGWKGTPLNSLSAWK 497
*************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 513 aa
Download sequence Send
to blast |
MQEQNEHDFV TFDDWGFDVE DETTTILHIK ETTDDNKKAK KSLISSLNIL KDYGNGFRKL 60
KGQKIDVVQI SENECTPSVC KLSTEEILRF GGQKFIQSTE FDHPFVNSLC SLSEEESRTV 120
MLVEHLLASA EKIGEKLFDS AINLLNECDK LSSKTGNPVE RLVYYFSRAL RERVDIEMGK 180
NCTKGLGLHG MRDLQESLRS INACTIAVQD MPMCQVVKFA GIQAIVENVE NSKKIHIVDL 240
EIKMGVQWTI LMQALANDHQ HNSQNPLEYL KVTALIDVQS RTNVEETGKR LMSFAESLHF 300
PLCFKIVMVE DILDLKKEDL DIDPDESLAV YSQYLLSNMI TQQDRLDFLM GFIKEMTPRI 360
MIVAEVEANL NSPVFVNRFI EALFYHGALF DLFEDCMKSN ESTRKAMEED VMWHGIRNIV 420
ANEGEERTMR HVTIELWREY FKRFGMEEMK MSNSSLYQAK TVVEKFTGKN SFTLEMNEKF 480
VTIGWKGTPL NSLSAWKFHK TSTFHRANYL TL*
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