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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PGSC0003DMP400008181 |
Common Name | LOC102581535 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
GATA |
Protein Properties |
Length: 169aa MW: 18464.8 Da PI: 10.2961 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PGSC0003DMP400008181 | genome | PGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 60.4 | 2.3e-19 | 33 | 67 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C+ CgttkTplWR gp g+k+LCnaCG++ rkk++
PGSC0003DMP400008181 33 CVDCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRR 67
********************************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 169 aa
Download sequence Send
to blast |
MVDTSDKVQE TGEMIGQNQT PERVSSETNQ KTCVDCGTTK TPLWRGGPAG PKSLCNACGI 60 RSRKKRRALL GLNKDDKKSK KSLSKSVVNH HPQNQSSNSS SSTSSSGEST NNVIVKNECI 120 PYKKRLLHFD REVGLQRPRS NSTHRRKLGE EEQAAFLLMA LSCGSVYA*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975451 | 1e-170 | HG975451.1 Solanum pennellii chromosome ch12, complete genome. |