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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PGSC0003DMP400004713 |
Common Name | LOC102594739 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
bHLH |
Protein Properties |
Length: 312aa MW: 34469.9 Da PI: 6.9606 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PGSC0003DMP400004713 | genome | PGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 13 | 0.00018 | 207 | 245 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq
PGSC0003DMP400004713 207 RKEKLGDRITALHQLVSPF-----GKTDTASVLSEAIGYIRFLQ 245
6677889999999999998.....8******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MAGNPSNNWW NNMLMNTSMH PHDSHELFSS TTTTNQHFYG SSNFLADNNP SQDHLPRSWS 60 QLLLSGLSCD QEKPDISDHF QHQYKKLENW EEIQNLNSIH NNNNIPSNSS FRVPFFDVKP 120 EELVSQGLYT NYHQDLSPAS SCVTTNLNHN NIFNFSSSPA NKITNNNKVV EVKHQDHSSE 180 SNSTNSGGVT KKARVQHSSA QPSLKVRKEK LGDRITALHQ LVSPFGKTDT ASVLSEAIGY 240 IRFLQAQIQA LSSPYMGNVA GSMNHTQQQS ADLRSRGLCL VPISCTQHVG SDNNNTVGDY 300 WAPALGGGGY L*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975515 | 1e-172 | HG975515.1 Solanum lycopersicum chromosome ch03, complete genome. |