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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
PGSC0003DMP400002457 |
Common Name | LOC102580219 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
TCP |
Protein Properties |
Length: 284aa MW: 31700.2 Da PI: 7.0503 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
PGSC0003DMP400002457 | genome | PGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 99.8 | 4.7e-31 | 35 | 166 | 2 | 89 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......................... 65
g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl +ak++i+el+ +
PGSC0003DMP400002457 35 FGGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLDAAKHEIDELPPLqippgslnpnlypmlgiggnshqit 123
689*************************************************************6666655555555555543322211 PP
TCP 66 ......ssssaseceaesssssasnsssg..............................k 89
+ n+s++ +
PGSC0003DMP400002457 124 snkeglN-----------------NKSINwddnvvpleppnnnnnnalgynsnflkwdpS 166
1111110.................112223333333333333233344444444444441 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009965 | Biological Process | leaf morphogenesis |
GO:0030154 | Biological Process | cell differentiation |
GO:0031347 | Biological Process | regulation of defense response |
GO:0045962 | Biological Process | positive regulation of development, heterochronic |
GO:0009507 | Cellular Component | chloroplast |
Sequence ? help Back to Top |
Protein Sequence Length: 284 aa
Download sequence Send
to blast |
MITREEKANE SKASSSTTSW TRLKDPRIVR VSRAFGGKDR HSKVCTVRGL RDRRVRLSVP 60 TAIQLYDLQD RLGLNQPSKV VDWLLDAAKH EIDELPPLQI PPGSLNPNLY PMLGIGGNSH 120 QITSNKEGLN NKSINWDDNV VPLEPPNNNN NNALGYNSNF LKWDPSNLSL AHSENSLSHQ 180 HQDIHHNFNL MSSMPLGSHH QVVVYPPGLP QFFHQHNIVG PSSSSEFDPK EINFQMLSNN 240 SGSENPMSSS TNSFRHSIDS TSQSIRPFHF LPSQNCDETE PSN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975441 | 1e-154 | HG975441.1 Solanum pennellii chromosome ch02, complete genome. |