PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

PEQU_41947

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bHLH

Protein Properties

Length: 137aa MW: 15212.5 Da PI: 10.5311

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_41947	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23.7	8.6e-08	6	50	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +rEr+RR+r+ ++++ L +l + +K +K +i++ A +++L PEQU_41947 6 HMMRERQRRERLSQSYADLHAMLSAR-----TKADKNSIVQTAAAVVREL 50 889********************998.....8999999999999888877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	11.084	1	50	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	5.1E-11	4	70	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	5.4E-5	6	50	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.5E-8	6	68	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	8.9E-5	7	56	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 137 aa Download sequence Send to blast
SRVFRHMMRE RQRRERLSQS YADLHAMLSA RTKADKNSIV QTAAAVVREL KGVKEGLQKR 60 NEELMKMVAP AMATEAAEGT SVRFEERMEL AGGEGRVITV RAENSTSAMD SVIGALRCLE 120 RMDVQARAIR TEFAGGG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	10	15	RQRRER

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020598371.1	6e-93	transcription factor BHLH148-like, partial
TrEMBL	A0A199VKK8	1e-39	A0A199VKK8_ANACO; Transcription factor bHLH92
TrEMBL	A0A2H3X3S2	9e-40	A0A2H3X3S2_PHODC; transcription factor BHLH148-like
STRING	XP_008777863.1	2e-40	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5940	34	50

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	2e-06	bHLH family protein