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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PEQU_40981 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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| Family |
TCP |
| Protein Properties |
Length: 333aa MW: 34736.9 Da PI: 10.064 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_40981 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 129.7 | 2.8e-40 | 49 | 161 | 4 | 114 |
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa.kskks 100
k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pai++ tgt++++a+++ ++s +s++s+ s++ ++++ +++ +
PEQU_40981 49 PKRSSKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAIIATTGTGTIPANFSsLNVSLRSTGSSLSAPTSKSAPLfTHHYE 147
689****************************************************************99988888888888777777666666677777 PP
TCP 101 qksaasalnlakes 114
++++s+l++++
PEQU_40981 148 ITDPSSMLAFQQPD 161
77777777777643 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
| GO:0005634 | Cellular Component | nucleus |
| Sequence ? help Back to Top |
| Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MDQTDHRHSM VHPPPPPATS ALLTGSSHVD SSLVISSSKP KTAAAIPPPK RSSKDRHTKV 60
DGRGRRIRMP AACAARVFQL TRELGHKSDG ETIEWLLQQA EPAIIATTGT GTIPANFSSL 120
NVSLRSTGSS LSAPTSKSAP LFTHHYEITD PSSMLAFQQP DVPLVAESTD TYLRKRFREN 180
LFKEEQEGAG AAASSSPPKP GSRPVIPATM WAVAPGSSGG AGAFWMLPVT APEAPSSLWT 240
FPTAGASSMQ APLQFGRAMG GMQLGSMFPA VQHLGLGISD SNLGMIGSIN PYSRSGRGGG 300
GEGGTVMNAD HGSGIDRRRS SQSGGGEGNS NSQ
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