PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

PEQU_40827

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

NAC

Protein Properties

Length: 95aa MW: 10790.4 Da PI: 4.7964

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_40827	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	54.3	4.6e-17	39	84	2	48
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 ppG+rFhPtdeelv +yLk+k+ +++++ ++ evd+yk+ePw+Lp PEQU_40827 39 PPGVRFHPTDEELVLFYLKRKICRQRIKP-AMVGEVDVYKWEPWELP 84 9***********************999.78************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	5.49E-19	35	90	IPR003441	NAC domain
PROSITE profile	PS51005	18.066	38	95	IPR003441	NAC domain
Pfam	PF02365	6.5E-8	39	81	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 95 aa Download sequence Send to blast
MGAAADCSAP AGGQIFSAYD CDDDYQEVGR QLGESKRWPP GVRFHPTDEE LVLFYLKRKI 60 CRQRIKPAMV GEVDVYKWEP WELPGILCIS NFLPI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020679103.1	2e-46	NAC domain-containing protein 17 isoform X1
Refseq	XP_020679104.1	2e-46	NAC domain-containing protein 17 isoform X1
TrEMBL	A0A2I0WFI7	4e-46	A0A2I0WFI7_9ASPA; NAC transcription factor NAM-A1
TrEMBL	A0A2I0WFL0	5e-45	A0A2I0WFL0_9ASPA; NAC domain-containing protein 78
STRING	XP_008796590.1	1e-26	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP14845	11	21

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	2e-19	NAC domain containing protein 17