PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Function |

Regulation |

Basic Information? help Back to Top

TF ID

PEQU_39588

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

MYB_related

Protein Properties

Length: 49aa MW: 5667.67 Da PI: 9.4672

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_39588	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.9	5.5e-09	14	45	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g W++eEde+l++ + ++G g+W+++++ g PEQU_39588 14 KGLWSPEEDEKLYNHIIRFGVGCWSSVPKLTG 45 688************************99765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.9E-13	6	43	IPR009057	Homeodomain-like
SuperFamily	SSF46689	7.03E-9	7	45	IPR009057	Homeodomain-like
PROSITE profile	PS51294	12.695	9	49	IPR017930	Myb domain
Pfam	PF00249	5.3E-7	14	43	IPR001005	SANT/Myb domain
CDD	cd00167	1.97E-5	17	42	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 49 aa Download sequence Send to blast
MGRHSCCLKQ KLRKGLWSPE EDEKLYNHII RFGVGCWSSV PKLTGLFAF

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021634721.1	3e-26	transcription repressor MYB6-like
Swissprot	Q8LPH6	6e-23	MYB86_ARATH; Transcription factor MYB86
TrEMBL	A0A1Q3B373	9e-26	A0A1Q3B373_CEPFO; Myb_DNA-binding domain-containing protein
STRING	cassava4.1_033233m	5e-25	(Manihot esculenta)
STRING	XP_010102491.1	5e-25	(Morus notabilis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	3e-25	myb domain protein 86