PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Binding Motif |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

PEQU_39300

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Dof

Protein Properties

Length: 297aa MW: 32806.4 Da PI: 5.0163

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_39300	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.4	3.1e-38	32	87	6	61
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprCds+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ PEQU_39300 32 PNCPRCDSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRG 87 58***************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-29	16	86	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	4.3E-32	32	86	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.91	32	86	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	34	70	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence Send to blast
MFSPEDHRFL SYEPRPAPVD HRRWKPSVEI APNCPRCDSS NTKFCYYNNY SLTQPRYFCK 60 GCRRYWTKGG SLRNVPVGGG CRKNRRGKSV RLSTDSITST SSSSSSLQID STRGPESGLR 120 PDQALDDMFD NYHPKSESGG SNIDMAVMYA RYLNHVPDKL PSDMDDSFGF IGSVTAELSS 180 SSTPSTDMNC QAISQADEAN LEFMAGNCGM DESVVELGFA VEHGSLASSS ILPEVNGGDV 240 FPMNWGSLYP NMPWPAQEKN SVVVAARAPQ EIGSNHHFQE LMIGDWISME QSGFEAF

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00405	DAP	Transfer from AT3G52440	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020599170.1	0.0	dof zinc finger protein DOF5.3-like
TrEMBL	A0A2I0WAC5	1e-171	A0A2I0WAC5_9ASPA; Dof zinc finger protein DOF3.5

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2659	36	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21340.1	8e-39	Dof family protein