PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_37771

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

MYB_related

Protein Properties

Length: 1187aa MW: 132577 Da PI: 9.0401

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_37771	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.8	1e-07	45	80	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W +E e++++a +++G + W++Ia+ + +R ++++ PEQU_37771 45 QWGRDELERFYEAYRKHGRD-WRKIAAAVR-NRPPEMV 80 699*************77.*******.9999877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.12E-9	40	91	IPR009057	Homeodomain-like
SMART	SM00717	1.9E-4	42	90	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	1.4E-4	44	85	IPR009057	Homeodomain-like
Pfam	PF00249	1.2E-6	45	85	IPR001005	SANT/Myb domain
CDD	cd00167	3.41E-5	46	88	No hit	No description
Pfam	PF06584	6.4E-32	640	740	IPR033471	DIRP domain
SMART	SM01135	2.6E-51	640	741	IPR033471	DIRP domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005730	Cellular Component	nucleolus
GO:0016592	Cellular Component	mediator complex
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1187 aa Download sequence Send to blast
MASARKSRNV NKRFSKVTEE LQDGEGGNPG KRTKKRKLSD MLGSQWGRDE LERFYEAYRK 60 HGRDWRKIAA AVRNRPPEMV EALYNMNKAY LSLPEGHATA AGLIAMMTDH YNILDGSDSE 120 AESNDASRTS RKTPKRGRAK FRVASKGSEG PYPDLLHYES ASSYGCLSLL KWRRSGGSRP 180 RAVGKRTPRI PVPFFLKEDR NRVVSPHKQG LKSECHAVDD EGVHVAALAL AEASKRGESP 240 QISQTPSRRR HLMYSPAPSG ERKIGDSKSF NGQVDDDHLE GSLGSREAEN GEFFKEASIS 300 ETRQKSKKVQ GKRSNAFVDE QFDDDREACS GTEEGVNVRK TRDDTEIDNT AARVLRPSKG 360 SKKRSRQLFC GDESSGLDAL QTLADLSLNI LFPTSTVESE SSMQVKEETQ TADIDEKPNI 420 PESLSTNLQR ERSKTVERKD KGRSTALDGV SGKGTKLSKG FAPDSKTSSD MKQQNSSSST 480 KIQKRKPKSL IEKISNSQFQ SDSQKSEFYQ TQAVGDGKRS SAKVKRASQI LMQQKLGKST 540 KSQECHFNAS DLGRVVVDPN ETAVADSSQN EVIFSTKSRN RRKMDLKKAL AVKDPKSSET 600 GVEEHMNRYP FSNRTYDLKE TLSHCLSSQL LRRWCKFEWF YSAIDYPWFA KSEFVEYLNH 660 VRLGHIPRLT RVEWGVIRSS LGKPRRLSSL FLQQEREKLE EYRESVRFHY ADLRAGVREG 720 LPTDLARPLS VGQRVIACHP RMREVHDGSV LTVDRNRCRV QFDRPELGVE FVMDVDCMPL 780 NPVENIPEAL QRQNLVINKF CSGFSDLRLD EQKEFKARDS LTFASTGRFE AVDGAPQVSS 840 YSYPMNTLMN QAKGDTLDAI VQAKAAVNEV AVAAQQAMYG QPFTLAQIQA READIRALAD 900 LSRTLDKKEA LLIELSQMNE EVSTKQKNGD HIKDLENFRK QYAMVLLQLR DVNDQVASAL 960 LFLRQRNTYE RNSTLTWNKS NETSVQQGSF NPTALFVNDS GSNVFEVIQS SRLKAKTLVD 1020 VAVEVMHALK DGEDAFVRIG EALELASSGN PVSTSAIAAV RNTSTDAAPD NKPYQDHGTS 1080 RLEAATVQVP SPKCQSSFNG TEVHCPTELI SSCVATLFMI QRCTERQYPP AEVAQILDSA 1140 VASLQPCCPQ NFPIFREIET CMGIIKNQML ALVPTPSAMV VSDAPIL

Sequence ? help Back to Top

Protein Sequence Length: 1187 aa Download sequence Send to blast

MASARKSRNV NKRFSKVTEE LQDGEGGNPG KRTKKRKLSD MLGSQWGRDE LERFYEAYRK  60
HGRDWRKIAA AVRNRPPEMV EALYNMNKAY LSLPEGHATA AGLIAMMTDH YNILDGSDSE  120
AESNDASRTS RKTPKRGRAK FRVASKGSEG PYPDLLHYES ASSYGCLSLL KWRRSGGSRP  180
RAVGKRTPRI PVPFFLKEDR NRVVSPHKQG LKSECHAVDD EGVHVAALAL AEASKRGESP  240
QISQTPSRRR HLMYSPAPSG ERKIGDSKSF NGQVDDDHLE GSLGSREAEN GEFFKEASIS  300
ETRQKSKKVQ GKRSNAFVDE QFDDDREACS GTEEGVNVRK TRDDTEIDNT AARVLRPSKG  360
SKKRSRQLFC GDESSGLDAL QTLADLSLNI LFPTSTVESE SSMQVKEETQ TADIDEKPNI  420
PESLSTNLQR ERSKTVERKD KGRSTALDGV SGKGTKLSKG FAPDSKTSSD MKQQNSSSST  480
KIQKRKPKSL IEKISNSQFQ SDSQKSEFYQ TQAVGDGKRS SAKVKRASQI LMQQKLGKST  540
KSQECHFNAS DLGRVVVDPN ETAVADSSQN EVIFSTKSRN RRKMDLKKAL AVKDPKSSET  600
GVEEHMNRYP FSNRTYDLKE TLSHCLSSQL LRRWCKFEWF YSAIDYPWFA KSEFVEYLNH  660
VRLGHIPRLT RVEWGVIRSS LGKPRRLSSL FLQQEREKLE EYRESVRFHY ADLRAGVREG  720
LPTDLARPLS VGQRVIACHP RMREVHDGSV LTVDRNRCRV QFDRPELGVE FVMDVDCMPL  780
NPVENIPEAL QRQNLVINKF CSGFSDLRLD EQKEFKARDS LTFASTGRFE AVDGAPQVSS  840
YSYPMNTLMN QAKGDTLDAI VQAKAAVNEV AVAAQQAMYG QPFTLAQIQA READIRALAD  900
LSRTLDKKEA LLIELSQMNE EVSTKQKNGD HIKDLENFRK QYAMVLLQLR DVNDQVASAL  960
LFLRQRNTYE RNSTLTWNKS NETSVQQGSF NPTALFVNDS GSNVFEVIQS SRLKAKTLVD  1020
VAVEVMHALK DGEDAFVRIG EALELASSGN PVSTSAIAAV RNTSTDAAPD NKPYQDHGTS  1080
RLEAATVQVP SPKCQSSFNG TEVHCPTELI SSCVATLFMI QRCTERQYPP AEVAQILDSA  1140
VASLQPCCPQ NFPIFREIET CMGIIKNQML ALVPTPSAMV VSDAPIL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	30	37	KRTKKRKL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020596183.1	0.0	protein ALWAYS EARLY 2-like isoform X2
TrEMBL	A0A2I0XGX2	0.0	A0A2I0XGX2_9ASPA; Protein ALWAYS EARLY 3
STRING	XP_008806732.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6230	23	31

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	DNA binding