 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
PEQU_37467 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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| Family |
NAC |
| Protein Properties |
Length: 183aa MW: 21797 Da PI: 9.2138 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_37467 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 161.3 | 3.7e-50 | 24 | 149 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
+pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++ + +
PEQU_37467 24 MPGFRFHPTEEELIEFYLRRKVEGKHFNV-ELITFLDLYRYDPWELPELAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRNESLRSI 121
79***************************.89***************8778899***************************************999*** PP
NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
glkktLvfy+g+apkg +t+W+m+eyrl
PEQU_37467 122 GLKKTLVFYSGKAPKGIRTTWIMNEYRL 149
**************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 183 aa
Download sequence Send
to blast |
MAIAAAMSND GEKDVDGHEH DLVMPGFRFH PTEEELIEFY LRRKVEGKHF NVELITFLDL 60
YRYDPWELPE LAAIGEKEWF FYVPRDRKYR NGDRPNRVTT SGYWKATGAD RMIRNESLRS 120
IGLKKTLVFY SGKAPKGIRT TWIMNEYRLP QSETDRFHMV IVLIVLDFRS PWDRRHNWKL 180
ITL
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 6e-54 | 8 | 149 | 2 | 142 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 6e-54 | 8 | 149 | 2 | 142 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 6e-54 | 8 | 149 | 2 | 142 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 6e-54 | 8 | 149 | 2 | 142 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 6e-54 | 8 | 149 | 2 | 142 | NAC domain-containing protein 19 |
| 4dul_B | 6e-54 | 8 | 149 | 2 | 142 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that acts as a floral repressor. Controls flowering time by negatively regulating CONSTANS (CO) expression in a GIGANTEA (GI)-independent manner. Regulates the plant cold response by positive regulation of the cold response genes COR15A and KIN1. May coordinate cold response and flowering time. {ECO:0000269|PubMed:17653269}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Circadian regulation with a peak of expression at dawn under continuous light conditions (PubMed:17653269). Circadian regulation with a peak of expression around dusk and lowest expression around dawn under continuous light conditions (at protein level) (PubMed:17653269). {ECO:0000269|PubMed:17653269}. |
