PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_35599
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 126aa    MW: 14579.5 Da    PI: 9.7565
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_35599genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR168.12.1e-21895290
        FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                 Y++YA+ vGF+vrk++ ++  ++++i+++++ C k+g+r+e+k + ++ + +++ trtgC+a +    + dg+w + k+++ HnH+la
  PEQU_35599  8 HYCAYAHYVGFTVRKDHITNWAKSKQIKSKDYICEKSGHRRESKLA-TTVKYRKTDTRTGCQAIVCYAIDLDGNWTIRKFVESHNHPLA 95
                6*****************************************9999.888889999*************99****************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031015.9E-19895IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
NEEDTYKHYC AYAHYVGFTV RKDHITNWAK SKQIKSKDYI CEKSGHRRES KLATTVKYRK  60
TDTRTGCQAI VCYAIDLDGN WTIRKFVESH NHPLAESGDK HLLRSSWKIS ELNANLLRSM  120
TGSGIR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020584372.18e-75putative protein FAR1-RELATED SEQUENCE 10
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-13FAR1-related sequence 5