PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_34977 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | bZIP | ||||||||
Protein Properties | Length: 339aa MW: 38783.4 Da PI: 5.0757 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.1 | 4.3e-09 | 169 | 224 | 4 | 59 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 +k+ rr ++NRe+A sR+R+k++i++Le k k Le ++L +l+ e +l PEQU_34977 169 SKKRRRQMRNRESAMISRERRKMYIKNLEMKNKHLEMDCRRLDYTLQCCMAENLAL 224 5999*******************************998888887777666665555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50217 | 8.634 | 168 | 210 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.9E-9 | 170 | 228 | No hit | No description |
Pfam | PF00170 | 3.3E-7 | 170 | 220 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.42E-9 | 170 | 228 | No hit | No description |
CDD | cd14704 | 7.94E-12 | 171 | 221 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0030968 | Biological Process | endoplasmic reticulum unfolded protein response | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005789 | Cellular Component | endoplasmic reticulum membrane | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence Send to blast |
MSMMSEGIRE PNVVDDFDID VLLQRFSDDP SLDFDIDLDL NLLRESWVPD SDLPPNVFQS 60 SEFTNPVSVP PRNDDPPTLE ADSPFSVSSF VNYIENFLME DVDWGDGGKG AGEDGVADFF 120 SGVLFDDSIK SKDDVDSPES YDASIKEGQS KEEVVPEVVV AEDDDVSVSK KRRRQMRNRE 180 SAMISRERRK MYIKNLEMKN KHLEMDCRRL DYTLQCCMAE NLALRQSLQF RKNRSCGASA 240 SKQESAVLFM ESLLLGSLFW FVSLVCLFLL PSLRSLRPNL KALSWLERGL AMVVARRKSR 300 NILTLGKYLK LNLLGLRRRC RSMRARMKFF LFPLHAFLA |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00019 | PBM | Transfer from AT1G42990 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020588397.1 | 0.0 | bZIP transcription factor 50 | ||||
TrEMBL | A0A2I0VHI6 | 1e-140 | A0A2I0VHI6_9ASPA; BZIP transcription factor 60 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6934 | 37 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G42990.1 | 2e-10 | basic region/leucine zipper motif 60 |