PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_34520
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 135aa    MW: 15501.8 Da    PI: 9.4433
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_34520genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.37.2e-2022108390
        FAR1   3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 Y+ YA+++GF+ rk++s    ++++ ++++fvC k g+++e k++  + r +ra+t tgC a+++   + +g+w v+k+ + HnH+la
  PEQU_34520  22 YCLYAHHIGFTARKEHSGFLPNSKKLKTKDFVCGKAGFKKELKDT-ITVRFKRANTMTGCPAMIRYFVDLEGNWSVNKFIESHNHPLA 108
                 999**************************************9988.99999***********************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.8E-1822108IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
SPDTEKLLNA VVQNENEAYE QYCLYAHHIG FTARKEHSGF LPNSKKLKTK DFVCGKAGFK  60
KELKDTITVR FKRANTMTGC PAMIRYFVDL EGNWSVNKFI ESHNHPLAED GDKHLLRSSR  120
KMCDISAYIL RSMTK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020573853.12e-90protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020581377.12e-90protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A2I0VS869e-40A0A2I0VS86_9ASPA; Protein FAR1-RELATED SEQUENCE 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.11e-10FAR1-related sequence 10