PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Orthologous Group |

Basic Information? help Back to Top

TF ID

PEQU_32989

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 268aa MW: 31026.4 Da PI: 7.2611

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_32989	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.6	1.7e-17	10	96	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y+ YA+++GFsv ++s++ ++++i++++f C k g+++e++ + ++ + ++a rt C+ +++ + +g w+v+k+ HnH+la PEQU_32989 10 YCVYAHHIGFSVMEDHSSYWPNSKNIKNNDFICGKDGHKKESNPT-DTVKFRKADMRTRCQIMVRNAIDVEGIWKVKKFIGIHNHPLA 96 99************************************99888.8899999*********9999**************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.7E-15	10	96	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence Send to blast
HNEQETYESY CVYAHHIGFS VMEDHSSYWP NSKNIKNNDF ICGKDGHKKE SNPTDTVKFR 60 KADMRTRCQI MVRNAIDVEG IWKVKKFIGI HNHPLAKSGE KHLMCSSRKI SELNANLLRS 120 MTRSGIRATD AYNFMATEVG VENLECMKGD SYNFIQRERR ERIEQGDVNS LIQLFMKRQA 180 KDTMFAELKL MSVELTSFFW SEGLSRLDYD CFGDVIIFDT SFRLNKYNLC SPFMGVNHHW 240 QKVLSGVDFL SDEIIDSFVG CLSPIIQI

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020592994.1	1e-138	uncharacterized protein LOC110033378
TrEMBL	A0A2I0VPA5	1e-84	A0A2I0VPA5_9ASPA; Protein FAR1-RELATED SEQUENCE 5
TrEMBL	A0A2I0X9W0	2e-84	A0A2I0X9W0_9ASPA; Protein FAR1-RELATED SEQUENCE 5

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-22	FAR1-related sequence 5