PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_32624
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 130aa    MW: 15586.7 Da    PI: 9.138
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_32624genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.81.8e-1355130278
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwev 78 
                  Y+ YA+ +GFsvrk++ +   ++++i++++fvC k   ++e k + e+ + +r+e+r gC a+++   +++++w v
  PEQU_32624  55 VYCVYAHYIGFSVRKKHATFWPNSRNIMTKEFVCGKTYLKKELKIT-ETVKYRRTESRSGCPAMIRYAVDEESNWTV 130
                 79**********************************9999998888.899999**********************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.7E-1255130IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    Send to blast
MRLFDRDRNG SLHRGRVHRQ EQYWQFGESE VTCTEQTTNM LLQTMVHNEK EAYEVYCVYA  60
HYIGFSVRKK HATFWPNSRN IMTKEFVCGK TYLKKELKIT ETVKYRRTES RSGCPAMIRY  120
AVDEESNWTV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020592536.13e-50protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A2I0VS862e-25A0A2I0VS86_9ASPA; Protein FAR1-RELATED SEQUENCE 5
TrEMBLA0A2I0VV983e-25A0A2I0VV98_9ASPA; Protein FAR1-RELATED SEQUENCE 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.11e-06FAR1-related sequence 6