PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_31826
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 176aa    MW: 19239.9 Da    PI: 8.9595
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_31826genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.00013139161123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C  C+k+F++   L  H r H
  PEQU_31826 139 YPCDQCNKVFKSGQALGGHKRAH 161
                 99*************99999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.17E-6138166No hitNo description
PfamPF139121.0E-12138162IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.718139166IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.606.4E-4139161IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE patternPS000280141161IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MLFSSRTHGE SNHGAGKTSF SNFKQAKHAD VKAACILMAL RRSNSETDID DAKRSKLIWI  60
CSKIERQRKT TKVMTMNHSD NYHEMLCQTL APPMLPSGSQ SINQCLLNNS NEEMNVGSGV  120
EKVALPLLAA VGAAVVETYP CDQCNKVFKS GQALGGHKRA HYTGPPLCRR GSNESC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020596979.11e-131zinc finger protein ZAT10-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.12e-06C2H2-like zinc finger protein