PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_31285
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 318aa    MW: 35775.3 Da    PI: 6.09
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_31285genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix71.81.2e-2294189185
    trihelix   1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 
                 +Wt++ v++Li ++ +++++ ++            +kk++W+ vsk ++++g+ +sp+qC++k+++lnkrykk++e+ +++ t++++++ +++d++
  PEQU_31285  94 KWTDDVVRLLISLVASIDDDAGSMDtagrkqstamQKKGKWKMVSKLLMQKGCYVSPQQCEDKFNDLNKRYKKLNEILGRGtTCQVVENPSLLDSM 189
                 7**************66666664322334445666**********************************************77*********9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.4E-1992216No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MNHQIGGGGG LFARHXXXXX XXXXXXXXXX XXXXXVFRSL EPSARHHLSP PPTQPMSLFS  60
DDEEAAIEGG GGEDSPNHDS LHRSKKGSPW QRMKWTDDVV RLLISLVASI DDDAGSMDTA  120
GRKQSTAMQK KGKWKMVSKL LMQKGCYVSP QQCEDKFNDL NKRYKKLNEI LGRGTTCQVV  180
ENPSLLDSMP HVSQNAKDDV RRILSSKHLF YREMCAYHNG QRVIEPKVGF LKCGDAHEVE  240
EGDGENDEEN EGDDEDVGCG SHDFGKAGYD ELCAEIDRVV QDSTKTLCER RVWIRKRILQ  300
LQQXXXXXXX GGEGEHTI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020571630.10.0uncharacterized protein LOC110018609
TrEMBLA0A2I0WBL51e-152A0A2I0WBL5_9ASPA; Uncharacterized protein
STRINGXP_010246931.12e-77(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1947058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.18e-61sequence-specific DNA binding transcription factors