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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_30954 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | G2-like | ||||||||
Protein Properties | Length: 228aa MW: 25472.7 Da PI: 9.0405 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 106.7 | 1.3e-33 | 23 | 77 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt+eLHerFv+av+qLGG+++AtPk + ++m+v+gLt++hvkSHLQkYRl PEQU_30954 23 RQRLRWTNELHERFVDAVTQLGGPDRATPKGVQRVMGVQGLTIYHVKSHLQKYRL 77 58****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 13.779 | 20 | 80 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 6.0E-32 | 22 | 78 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 9.14E-18 | 22 | 77 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 8.4E-26 | 24 | 78 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 3.8E-9 | 25 | 76 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 2.6E-23 | 108 | 154 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence Send to blast |
MNISAMAPHA GGNNQNNPGA ASRQRLRWTN ELHERFVDAV TQLGGPDRAT PKGVQRVMGV 60 QGLTIYHVKS HLQKYRLAKC LPDSSAEVTR ELKESDDVLS KLDNSSGIQI SEALKLQMEV 120 QKRLHEQLEV QRQLQLRIEA QGKYLKKIIE EQQRLNGGGF MPISMDQSSE DKTDPSTPTP 180 IAKSSLHAKS NTNLLNSLSF EDSHHEPHTP ETGSPLMSLK HERQVKSQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-21 | 23 | 79 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-21 | 23 | 79 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 2e-21 | 23 | 79 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-21 | 23 | 79 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-21 | 23 | 79 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-21 | 23 | 79 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-21 | 23 | 79 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-21 | 23 | 79 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-21 | 23 | 79 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-21 | 23 | 79 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-21 | 23 | 79 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-21 | 23 | 79 | 2 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020593060.1 | 1e-169 | myb family transcription factor PHL7-like | ||||
Swissprot | Q9SJW0 | 5e-85 | PHL7_ARATH; Myb family transcription factor PHL7 | ||||
TrEMBL | A0A2I0VKQ4 | 1e-125 | A0A2I0VKQ4_9ASPA; Protein PHR1-LIKE 1 | ||||
STRING | XP_008782978.1 | 4e-97 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2220 | 38 | 96 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 3e-70 | G2-like family protein |