PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_29621
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family HSF
Protein Properties Length: 485aa    MW: 53689.6 Da    PI: 4.9431
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_29621genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.21.8e-35181102103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d++++ ++sw   +nsfvv++  ef++++Lpk+Fkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F kg+k+ll++i+
    PEQU_29621  18 FLSKTYDMVDDPATDAIVSWGPGNNSFVVWNVPEFSRDLLPKHFKHNNFSSFVRQLNTYGFRKVDPDK---------WEFANEGFLKGQKHLLKSIN 105
                   9*********************99*****************************************999.........******************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   r+k +
    PEQU_29621 106 RRKPS 110
                   **976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.101.6E-3810102IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467851.5E-3413107IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004151.3E-6014107IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.1E-191841IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004471.1E-3018107IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.1E-195668IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043405781IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000562.1E-196981IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009408Biological Processresponse to heat
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 485 aa     Download sequence    Send to blast
MTSPAVSATL TASAPPPFLS KTYDMVDDPA TDAIVSWGPG NNSFVVWNVP EFSRDLLPKH  60
FKHNNFSSFV RQLNTYGFRK VDPDKWEFAN EGFLKGQKHL LKSINRRKPS NAHTQQQQQP  120
NAPSGAVGAC VEVGKFGLEE EIERLKRDKN VLMQELVRLR QQQQGTDLQL QTLTQRLQGM  180
EQRQQQMMSF LAKAMQSPGF LAQLVQQHDS SRRVVGVVGK KRRLPKQENN LDGEISASQD  240
GQIIKYQPLM TEAVKSLLMQ ILKCESSSML ETRANSDGFL IENFSSHDGL RASENRNSCF  300
TLKEFPAPCL PSSSCFPAIH PSSAGISDMP APSKFPGIDL LSVVPETMSS SSTSMSAHES  360
TKIPGIMPND GSLDIAVDSL VPLVPDMFLG QLVDDSIPIE TENFSINSGI GIPTEDDSKL  420
PCINDSFWEQ FLVDSSLSSD VAQEVDSSIQ ETSDMHPEME TVWDSTQHMQ HLTERMGLLS  480
PEAKT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ldu_A2e-251611018123Heat shock factor protein 1
5d5u_B2e-25110712129Heat shock factor protein 1
5d5v_B2e-25110712129Heat shock factor protein 1
5d5v_D2e-25110712129Heat shock factor protein 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator that specifically binds DNA of heat shock promoter elements (HSE). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Not induced by heat stress. {ECO:0000269|PubMed:18064488}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020599169.10.0heat stress transcription factor A-1-like
SwissprotQ84T611e-173HSFA1_ORYSJ; Heat stress transcription factor A-1
TrEMBLA0A2I0W8J20.0A0A2I0W8J2_9ASPA; Heat stress transcription factor A-1
STRINGXP_008777830.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50973151
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.11e-102heat shock transcription factor A1D
Publications ? help Back to Top
  1. Chauhan H,Khurana N,Agarwal P,Khurana P
    Heat shock factors in rice (Oryza sativa L.): genome-wide expression analysis during reproductive development and abiotic stress.
    Mol. Genet. Genomics, 2011. 286(2): p. 171-87
    [PMID:21792744]