PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Orthologous Group |

Basic Information? help Back to Top

TF ID

PEQU_28230

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

FAR1

Protein Properties

Length: 219aa MW: 25119.4 Da PI: 7.4098

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_28230	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	30.1	1.6e-09	40	81	49	90
FAR1 49 ekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++ + +a+t+tgC+a+++ + dg+w ++k+++ HnH+la PEQU_28230 40 TTVKYIKANTQTGCQAMVRCVIDLDGNWTIKKFVESHNHPLA 81 555667899*******************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.1E-7	40	81	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence Send to blast
MLVSPYARTT QLTGLNSSKL SFRIIFVKNH VIKEESQLAT TVKYIKANTQ TGCQAMVRCV 60 IDLDGNWTIK KFVESHNHPL AESGDKHLLR SSRRISELNA NLLRSMTGSG IRAADAFNFL 120 ATKVGGIENL ECTRQDAYNF IQRDKRSRIE QGDVNSLLQL FMERQNEDSM FAWDFQSDEE 180 GRLTSFFWSD RSCRLDYDCF GDVIIFDTNL KDNLTIPRQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020597645.1	1e-110	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2I0XAY7	1e-58	A0A2I0XAY7_9ASPA; Protein FAR1-RELATED SEQUENCE 5

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1212	5	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-23	FAR1-related sequence 5