PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_27900
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family C2H2
Protein Properties Length: 216aa    MW: 24112.8 Da    PI: 7.7719
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_27900genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.16.8e-05145167123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C +C+k+Fs++  L  H   H
  PEQU_27900 145 YECDNCNKVFSSHQALGGHRAIH 167
                 99*************99998877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.58E-6144171No hitNo description
Gene3DG3DSA:3.30.160.602.9E-4145167IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.365145172IPR007087Zinc finger, C2H2
PfamPF139121.1E-8145167IPR007087Zinc finger, C2H2
PROSITE patternPS000280147167IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MNGSSLQFCF SDVKSLQHGW EREPKRKKDL SVLRNSDDED GKTPWLRLGI GSKSDEKGEE  60
ALVLLLPAGN DDDGRDGLTP PSPPCPSYRG KQIERNRENC GSTDRQTQWR TQEEDVARFL  120
FELSKACLER APVSNQNHPA TPAGYECDNC NKVFSSHQAL GGHRAIHKNV KGCSAASLEF  180
RSAGTRNNQI KNQNNNVYNQ NIMARLLENM TLSIVP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020572579.11e-75zinc finger protein ZAT5-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35243262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17180.14e-11C2H2-like zinc finger protein