PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_27727
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family B3
Protein Properties Length: 344aa    MW: 39217 Da    PI: 8.9504
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_27727genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B365.29.5e-2110911098
                HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                 ++++ +vlpkkf+e+++g+     t+ l+ +sg +W v+l  +k+ +++vl  GW++Fv a+g+ e+D++vFk+dg s+f  +v +f+
  PEQU_27727 10 DFSKC-MVLPKKFIERFKGE--LLETVELKVLSGDKWHVEL--KKTCDGVVLNCGWRNFVAAHGILENDTLVFKYDGCSSF--LVLMFE 91
                45555.***********887..6679***************..********************************987777..887776 PP
2B361.51.4e-19241329192
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+++++ps+++k+  l++p +fa ++   + + + l+++d +  sW+v +    +s ++ +++GWk Fv++n+Lk+gD++ F+l + +e+  
  PEQU_27727 241 FVSIMVPSSTSKRFYLTIPMSFAIQYLPRSSRRVLLQVKD-KESSWSVHC--LVQSHSVGFSSGWKAFVQDNQLKVGDICFFELLEAEEEDI 329
                 8899*******************99943333555556555.669******..89999999***********************875544333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086314.24193IPR003340B3 DNA binding domain
CDDcd100173.06E-19290No hitNo description
SuperFamilySSF1019361.31E-22297IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.8E-21295IPR015300DNA-binding pseudobarrel domain
SMARTSM010191.2E-13393IPR003340B3 DNA binding domain
PfamPF023623.4E-181191IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.0E-23234337IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.35E-22234337IPR015300DNA-binding pseudobarrel domain
CDDcd100179.05E-16239317No hitNo description
PROSITE profilePS5086314.861241339IPR003340B3 DNA binding domain
SMARTSM010197.3E-17241339IPR003340B3 DNA binding domain
PfamPF023626.9E-19241335IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MHFSKSMTGD FSKCMVLPKK FIERFKGELL ETVELKVLSG DKWHVELKKT CDGVVLNCGW  60
RNFVAAHGIL ENDTLVFKYD GCSSFLVLMF EQSGCEKVAS HCSMRKDRME ELCAIASGKK  120
PRLHSNRSSS MNYEQPNPLT VDRITSRAHK DVKEKHFRKR KDTKSVPRRK KHFAGSRRKN  180
SLNEQESAVI EGTTSGGDEV SLTEQGDPMD FIISKKARLT DVEKNVVVRF ADTIQTDRPS  240
FVSIMVPSST SKRFYLTIPM SFAIQYLPRS SRRVLLQVKD KESSWSVHCL VQSHSVGFSS  300
GWKAFVQDNQ LKVGDICFFE LLEAEEEDIL MTVHINRTEE ALPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020599110.10.0putative B3 domain-containing protein Os03g0621600
TrEMBLA0A2I0VGR51e-138A0A2I0VGR5_9ASPA; B3 domain-containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP56234179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-28B3 family protein