PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_27343
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family G2-like
Protein Properties Length: 373aa    MW: 41950.6 Da    PI: 6.8665
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_27343genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.81.8e-31248303156
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                 k+r++W+peLH+rF+ a++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  PEQU_27343 248 KARRCWSPELHRRFIIALQQLGGAQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 303
                 68****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.052245305IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.7E-28246307IPR009057Homeodomain-like
SuperFamilySSF466892.81E-17246306IPR009057Homeodomain-like
TIGRFAMsTIGR015576.5E-26248303IPR006447Myb domain, plants
PfamPF002492.9E-6250301IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009266Biological Processresponse to temperature stimulus
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010452Biological Processhistone H3-K36 methylation
GO:0048579Biological Processnegative regulation of long-day photoperiodism, flowering
GO:1903507Biological Processnegative regulation of nucleic acid-templated transcription
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
DGDKMGLLAP ELGLDLKLFT KRTIFSCLKD EIQAGSRAAK LEDFARRLEE ERRKIEAFKR  60
ELPLCMLLLA DVMVLKEFIP LETRSDEYKE EEKAMNLEKE SKEKMEWMSS AQLWSDNSSH  120
ESIDGKEDSQ EVFHQRTDQF VFVSSHGRKD CDALFLESNT GRAFLPFKAM AAPRKEEEKL  180
SISLPDLSLM PLPIKVPCSA PITTVAAEED NRSSGLNSKA VTIASSSPRN EHLGLQPQQQ  240
YQQNPQRKAR RCWSPELHRR FIIALQQLGG AQVATPKQIR ELMKVDGLTN DEVKSHLQKY  300
RLHTRRIPNS SATQVNRPVV MVGGLWVSQD QQNASQSGSP QGPLQLTCAA QALSMTGGDS  360
CTDDGKSESY SWK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A8e-14248301255Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B8e-14248301255Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A8e-14248301154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B8e-14248301154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C8e-14248301154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D8e-14248301154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A8e-14248301255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C8e-14248301255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D8e-14248301255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F8e-14248301255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H8e-14248301255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J8e-14248301255Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00261DAPTransfer from AT2G03500Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020592704.10.0myb family transcription factor EFM-like isoform X1
TrEMBLA0A2I0WVN20.0A0A2I0WVN2_9ASPA; Two-component response regulator ARR1
STRINGXP_008792589.11e-120(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.14e-53G2-like family protein