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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
PEQU_26907 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
|
| Family |
LSD |
| Protein Properties |
Length: 254aa MW: 27070.5 Da PI: 6.4892 |
| Description |
LSD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_26907 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-LSD1 | 36 | 1.1e-11 | 170 | 193 | 1 | 24 |
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdt 24
Cg+C lLsYPrG+++++Ca+C+t
PEQU_26907 170 CGSCSELLSYPRGSKYIQCACCQT 193
***********************9 PP
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| 2 | zf-LSD1 | 32.4 | 1.6e-10 | 208 | 232 | 1 | 25 |
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdtV 25
Cg+C +lL+YP+ ++s RC++C++V
PEQU_26907 208 CGKCSVLLMYPYTSSSLRCSSCHHV 232
************************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 254 aa
Download sequence Send
to blast |
MSSSPDSIPP GWEEAIASSP ETLPPGFENH SSLSSPTSPP QENPPSSLSS PASPQPQENQ 60
VNCTDTSLSP SPTLPKESRS KHPPSSLNPP QENRIPLSHS PRPPPQEAPV SLSISFPPPL 120
LEKRDAMPRP SLQSQDGQGP VPSSQFPRGN LGSLNPPLQQ SLPEMGQMVC GSCSELLSYP 180
RGSKYIQCAC CQTTNFVLEA HQVGIVKCGK CSVLLMYPYT SSSLRCSSCH HVTEIGPQNV 240
RPPVSVLQGF PAPP
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