PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_26225
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 129aa    MW: 14823.3 Da    PI: 11.2019
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_26225genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.84e-0947104967
        FAR1   9 evGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklk 67 
                 ++ F+v+k++s    ++++ ++++fvC k g+++e +++  + r +ra trtgC+a+++
  PEQU_26225  47 HIEFTVQKKHSGFWPNSKKLKTKNFVCGKAGFKKELTDT-ITVRFKRADTRTGCQAMIR 104
                 56799*****99999********************9988.99999************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.8E-649104IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    Send to blast
MRSIKRRMGS LGKEDRAEGV GKEILDHPRQ RNCLMQLSTT RMKHMNHIEF TVQKKHSGFW  60
PNSKKLKTKN FVCGKAGFKK ELTDTITVRF KRADTRTGCQ AMIRYFVDLD AMVGKEIHRK  120
SQPSVGGGR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020589810.15e-36uncharacterized protein LOC110031106
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587