PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_26080
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 109aa    MW: 12822.5 Da    PI: 9.2275
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_26080genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR146.89.5e-151198290
        FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                 Y++YA++vGF+v k++  +  + ++i+++++ C k  +++e++   ++ + ++a+t +g +a+++   + dg+w ++k+++ Hn +la
  PEQU_26080 11 HYCAYAHHVGFTVHKDHDIYWAKFKQIKSKNYICGKASHKRESQVV-NTVKYKKANTMIGYQAMVRYAVDVDGNWTIKKFVETHNYPLA 98
                69*******************9****************99999888.8889999*******************************9996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.6E-121198IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    Send to blast
IVHNEEEAYE HYCAYAHHVG FTVHKDHDIY WAKFKQIKSK NYICGKASHK RESQVVNTVK  60
YKKANTMIGY QAMVRYAVDV DGNWTIKKFV ETHNYPLAEY GDKHLLRSS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020587208.13e-55protein FAR1-RELATED SEQUENCE 5-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587