PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_25592
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family FAR1
Protein Properties Length: 208aa    MW: 23922.1 Da    PI: 8.7707
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_25592genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR160.93.9e-19995390
        FAR1  3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                Y++YA+++GF++rk++     +++ i++++f C k g+++e +++ +  + +r  trtgC  +++   + +g+w v+k+ + HnH+la
  PEQU_25592  9 YCAYAHHIGFTMRKDHVGFWPNSKMIKTKDFICGKVGFKKELNNN-VAVKYRRGDTRTGCPVMIRYVVDVEGNWSVKKFIKTHNHPLA 95
                99***************************************9999.999999**********************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.7E-17995IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
NEKEAYENYC AYAHHIGFTM RKDHVGFWPN SKMIKTKDFI CGKVGFKKEL NNNVAVKYRR  60
GDTRTGCPVM IRYVVDVEGN WSVKKFIKTH NHPLAADGDK HLLRSSRKMG DVSAQVLKSM  120
TKSGIKTSDA FSFLATEFGG VENLDYTKRD AYNFIQRERN SIIENGDANS LLRLFTERQP  180
EDTMFAWDIQ IDESGSLLNF FWSDQILV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020597010.11e-156protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A2I0VPA51e-80A0A2I0VPA5_9ASPA; Protein FAR1-RELATED SEQUENCE 5
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1212587
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-24FAR1-related sequence 5