PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

PEQU_25177

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

TCP

Protein Properties

Length: 251aa MW: 27085.3 Da PI: 7.2447

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_25177	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	120.1	2.7e-37	52	138	2	81
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.......eaesssss 81 +k+++++++hTkv+gR+RR+R++a+caar+F+L+ eLG+++d++ti WLlqqa+pai++ tgt++++a++ +++ss s+ PEQU_25177 52 SPKRSSTKDRHTKVDGRGRRIRMPALCAARVFQLTHELGLKSDGETIKWLLQQAEPAIIASTGTGTIPANFNslnislcNSDSSISA 138 689*************************************************************99999555423322122222222 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	2.2E-34	57	145	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	25.499	58	112	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence Send to blast
MMDGVEPIDT GILSHHSNLP LQFLQKKESK ELPISSSSAN HHHSISTNPK PSPKRSSTKD 60 RHTKVDGRGR RIRMPALCAA RVFQLTHELG LKSDGETIKW LLQQAEPAII ASTGTGTIPA 120 NFNSLNISLC NSDSSISAGP SHHFHSSVAP PPVRPHPNWD VERWDNELIA TTAHLFASGE 180 PVWTSSSTAT MFREFMNIPM ATPMTSPLGG GGGGGVGHSG LMAALNSFRP VEAGSQDERE 240 RNDHSMTTTE S

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020583243.1	0.0	transcription factor TCP15-like
TrEMBL	A0A1D6ZNG4	0.0	A0A1D6ZNG4_PHAEQ; TCP transcription factor
STRING	GSMUA_Achr7P20990_001	2e-52	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3744	34	79

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	2e-44	TCP family protein