PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_24486
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family G2-like
Protein Properties Length: 277aa    MW: 30512.3 Da    PI: 8.0701
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_24486genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.57.1e-3447101155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 ++rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  PEQU_24486  47 RQRLRWTNELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 101
                 58****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.55944104IPR017930Myb domain
SuperFamilySSF466895.73E-1846101IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-3246102IPR009057Homeodomain-like
TIGRFAMsTIGR015579.0E-2648102IPR006447Myb domain, plants
PfamPF002491.1E-949100IPR001005SANT/Myb domain
PfamPF143791.9E-23133179IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MYQPSLSNIS LANYPSLAHD QPVEMNSTAM SPHAAGNNPN NPSSASRQRL RWTNELHERF  60
VDAVAQLGGP DRATPKGVLR VMGVQGLTIY HVKSHLQKYR LAKYLPDSSA EGAKVEKKES  120
DDVLSNLESS TGMQITEALK LQMEVQKRLH EQLEVQRQLQ LRIEAQGKYL KKIMEEQQRL  180
SGGLAPTSTN QTLEDKSDPS TPVPVTKSSL HGSLFKSFSF EDSHHGPLTP ETGSPSGSPK  240
HERSVKMQGD RDSPKQELML GHHILESSSS LFLGGGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-2447104158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-2447104158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-2447104158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-2447104158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020588294.10.0myb family transcription factor PHL7-like
RefseqXP_020588295.10.0myb family transcription factor PHL7-like
SwissprotQ9SJW01e-94PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A2I0WSM71e-169A0A2I0WSM7_9ASPA; Protein PHR1-LIKE 1
STRINGXP_008782978.11e-117(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22203896
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.17e-78G2-like family protein