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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
PEQU_23598 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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| Family |
MYB |
| Protein Properties |
Length: 333aa MW: 37750.4 Da PI: 7.8226 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PEQU_23598 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 54.9 | 2e-17 | 45 | 92 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+ Ed +l+++vk +G g+W+++ + +g+ R++k+c++rw ++l
PEQU_23598 45 KGPWTAAEDAILIEYVKTHGEGNWNAVQKNIGLQRCGKSCRLRWANHL 92
79******************************************9986 PP
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| 2 | Myb_DNA-binding | 49.4 | 1e-15 | 98 | 141 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
+g++++eE+ l++ ++ qlG++ W++ a++++ gRt++++k++w++
PEQU_23598 98 KGSFSPEEEALILYLHSQLGNK-WARMAAHLP-GRTDNEIKNYWNT 141
799*******************.*********.***********97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009555 | Biological Process | pollen development |
| GO:0009789 | Biological Process | positive regulation of abscisic acid-activated signaling pathway |
| GO:0043068 | Biological Process | positive regulation of programmed cell death |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0090406 | Cellular Component | pollen tube |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MTNLDSFNCT YDKKTAVDIK EEPGVVPPAK SSANAGPPEA SPLKKGPWTA AEDAILIEYV 60
KTHGEGNWNA VQKNIGLQRC GKSCRLRWAN HLRPNLKKGS FSPEEEALIL YLHSQLGNKW 120
ARMAAHLPGR TDNEIKNYWN TRIKRRQRAG LPLYPPNIQQ KVDGQNQRQE TFTNIQKHCL 180
AKNYNPHISP TMTTGYDNID TVNGNTNYIG NFNDNESPQQ LQSFYCPVKM EHSPTALLPP 240
YIENQNWLVP PPTTTLVDYN NIYHHNQFKG SQFPEKLYNQ DVLLENMPLS SVAAMEPPSP 300
RLPSTPNCNE SIMNCFYHMD NSNNSYNTSG ELF
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